{"id":1627,"date":"2017-10-21T19:25:13","date_gmt":"2017-10-21T17:25:13","guid":{"rendered":"http:\/\/www.datascience.rs\/?p=1627"},"modified":"2017-10-21T19:25:13","modified_gmt":"2017-10-21T17:25:13","slug":"primena-r-u-analizi-mikrobiote","status":"publish","type":"post","link":"http:\/\/imuno-srbija.com\/data-science\/en\/2017\/10\/21\/primena-r-u-analizi-mikrobiote\/","title":{"rendered":"Primena R-a u analizi mikrobiote"},"content":{"rendered":"<p>Na predstoje\u0107em BelgradeR meetupu-u \u0107emo opet pri\u010dati o\u00a0tome kako se R koristi u oblasti bioinformatike. Meetup se odr\u017eava 31. oktobra u 18 \u010dasova u beogradskom Startit centru.<!--more--><\/p>\n<p>BelgradeR meetup se vra\u0107a nakon du\u017ee pauze. Tema novog dru\u017eenja bi\u0107e primena R-a u analizi mikrobiote. Kako izgleda transformacija informacije zakopane u otpadu ljudskog metabolizma u znanje i \u017eive lekove (eng. <em>live drugs<\/em>)? Kako uz pomo\u0107 programskog jezika i razli\u010ditih Bioconductor biblioteka do\u0107i do korisnog znanja u ovoj oblasti? Odgovore na ova pitanja \u0107e nam dati predava\u010d <a href=\"https:\/\/www.linkedin.com\/in\/svetlana-bojic-7289134\/\" target=\"_blank\" rel=\"noopener\">Svetlana Boji\u0107<\/a> koja se ve\u0107 neko vreme bavi analizom mikrobiote.<\/p>\n<p>Na predavanju \u0107e biti re\u010di o tome kako analizom ekolo\u0161kih parametara mo\u017eemo da zaklju\u010dimo za\u0161to se bakterije iz debelog creva ne pona\u0161aju kao idealno vaspitani &#8220;cimeri&#8221; ponekad. Na\u010de\u0107emo specifi\u010dnosti statisti\u010dkog testiranja u svetlu \u010dinjenice da su bakterije povezane u rodoslovna stabla. Bi\u0107e prikazani neki stvarno <em>cool<\/em> plotovi i ilustrovana upotreba ve\u0107eg broja Bioconductor paketa kao \u0161to su \u201cphilr\u201d, \u201cphyloseq\u201d, \u201cape\u201d i drugi koji se koriste u analizi mikrobiote.<\/p>\n<p>Dota\u0107i \u0107emo se i izazova koji postoje pri primeni \u201c(ontology) term enrichment\u201d analize na de\u0161ifrovanje toga \u0161ta nam demografske promene u bakterijskom dru\u0161tvu govore o na\u0161em zdravlju i sre\u0107i.<\/p>\n<p>Meetup se odr\u017eava u Startit centru Beograd, ulica Savska br. 5. Dru\u017eenje smo zakazali za 31. oktobar u 18 \u010dasova, a svoje prisustvo mo\u017eete potvrditi na <a href=\"https:\/\/www.meetup.com\/BelgradeR\/events\/244374441\/\" target=\"_blank\" rel=\"noopener\">BelgradeR meetup stranici<\/a>.<\/p>\n<p><strong>O predava\u010du<\/strong>: Svetlana Boji\u0107 je zavr\u0161ila Matemati\u010dku gimnaziju i Medicinski fakultet Univerziteta u Beogradu. Neko vreme je radila na Katedri za statistiku i informatiku Medicinskog fakulteta. Od 2015. godine je deo kompanije HITtest, startupa koji se bavi analizom mikrobiote.<\/p>\n<!--themify_builder_content-->\n<div id=\"themify_builder_content-1627\" data-postid=\"1627\" class=\"themify_builder_content themify_builder_content-1627 themify_builder tf_clear\">\n    <\/div>\n<!--\/themify_builder_content-->","protected":false},"excerpt":{"rendered":"<p>Na predstoje\u0107em BelgradeR meetupu-u \u0107emo opet pri\u010dati o\u00a0tome kako se R koristi u oblasti bioinformatike. Meetup se odr\u017eava 31. oktobra u 18 \u010dasova u beogradskom Startit centru.<\/p>","protected":false},"author":1,"featured_media":1628,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":[],"categories":[25],"tags":[50,106],"_links":{"self":[{"href":"http:\/\/imuno-srbija.com\/data-science\/en\/wp-json\/wp\/v2\/posts\/1627"}],"collection":[{"href":"http:\/\/imuno-srbija.com\/data-science\/en\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"http:\/\/imuno-srbija.com\/data-science\/en\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"http:\/\/imuno-srbija.com\/data-science\/en\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"http:\/\/imuno-srbija.com\/data-science\/en\/wp-json\/wp\/v2\/comments?post=1627"}],"version-history":[{"count":0,"href":"http:\/\/imuno-srbija.com\/data-science\/en\/wp-json\/wp\/v2\/posts\/1627\/revisions"}],"wp:featuredmedia":[{"embeddable":true,"href":"http:\/\/imuno-srbija.com\/data-science\/en\/wp-json\/wp\/v2\/media\/1628"}],"wp:attachment":[{"href":"http:\/\/imuno-srbija.com\/data-science\/en\/wp-json\/wp\/v2\/media?parent=1627"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"http:\/\/imuno-srbija.com\/data-science\/en\/wp-json\/wp\/v2\/categories?post=1627"},{"taxonomy":"post_tag","embeddable":true,"href":"http:\/\/imuno-srbija.com\/data-science\/en\/wp-json\/wp\/v2\/tags?post=1627"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}